SRR3126921.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126921.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1992916
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19810	0.9940208217506408	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	6181	0.31014854615046494	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	5392	0.27055831756080034	No Hit
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	5032	0.2524943349343374	No Hit
CGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	4377	0.21962792210007848	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	3912	0.1962952778742305	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2942	0.14762288024181652	No Hit
AGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	2250	0.11289989141539333	No Hit
GGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	2232	0.11199669228407017	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2037	0.10221203502806943	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7045	85.81756	1
CGTAGGG	480	77.39464	2
AGGGCAT	1770	76.206825	5
GGGTACG	155	75.804245	6
GCATAGG	515	73.086426	1
AGGGAAT	2530	72.820015	5
AAGGGTA	1380	71.86023	4
GTACGGG	445	71.857796	2
AGGGTAT	1045	71.50988	5
AAGAGGG	6010	71.2802	2
GGTAAGG	1140	70.98679	1
AAGGGTC	1205	70.59545	4
CGAGGGA	925	70.116875	3
AAGGGCA	2865	69.88278	4
ACGGGTA	230	69.476234	4
TAGGGCA	860	69.40495	4
AGTAAGG	1140	68.923225	1
AGAGGGC	2435	68.905594	3
AGGGTAA	820	68.77849	5
ATGAGGG	2845	68.76003	2