SRR3126920.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126920.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2118488
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21037	0.9930195497921158	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	6617	0.31234540861218	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	5858	0.2765179694196993	No Hit
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	5756	0.271703214745611	No Hit
CGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	4716	0.22261159846078904	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	3970	0.1873978044718686	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3109	0.14675561060529962	No Hit
AGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	2598	0.12263463375766114	No Hit
GGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT	2477	0.11692301301683086	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7480	86.50159	1
GGTAAGG	1135	79.188194	1
ATTGCGG	240	78.4281	1
ACGGGAT	450	78.32445	4
TAGGGCA	895	76.66169	4
AGGGCAT	1700	76.02078	5
AGTAAGG	1065	74.67239	1
CGTAGGG	570	74.2021	2
AGGGTAC	805	74.140656	5
GAATAGG	1110	73.76481	1
TAGGGCG	325	73.745476	4
AGTAGGG	2885	72.65033	2
AGGGATG	2185	71.83624	5
AGGGAAT	2995	71.70805	5
TAGCGGG	920	71.513626	2
GTAGGGC	705	71.32524	3
AAGGGTA	1520	70.80117	4
AGGGTAT	1170	70.69283	5
ACGGGTA	300	70.492004	4
AGAGGGC	2630	70.40266	3