SRR3126913.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126913.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1130494
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5638	0.49872002858927156	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4452	0.39381013963806977	No Hit
CCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTG	2752	0.24343340168103503	No Hit
GCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTG	2635	0.23308394383340383	No Hit
CTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC	2538	0.22450362407938476	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2527	0.22353059812789808	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2233	0.19752426815179913	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1886	0.16682972222762793	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1751	0.15488804009574575	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTT	1197	0.10588291490268856	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGCGC	265	90.43972	5
ACGGGTA	120	90.35001	4
CGTAGGG	235	90.274445	2
CGTTTTT	2955	86.37492	1
ACGACGG	55	85.77984	1
CGCTACG	365	85.23789	3
GACCGAT	95	84.09308	8
AGTAAGG	710	83.72595	1
CGAAGGG	965	83.05041	2
GTTACGG	80	82.56309	1
AGGGATG	1885	82.51855	5
ACGGGAT	395	82.344315	4
GCTACGA	380	81.87324	4
GGGCGAT	375	81.454865	6
CGAGGGA	605	81.03256	3
TAGGGCG	200	80.13653	4
CTACGAC	390	79.52693	5
AGGGCAT	990	79.27134	5
GTAGGGT	280	79.12641	3
AACGAGG	370	79.05655	1