SRR3126901.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126901.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1952947
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14341	0.7343261235455955	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4705	0.24091795629886525	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3010	0.15412604643136757	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2702	0.13835500912211135	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	2542	0.1301622624679523	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	2540	0.1300598531347753	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	2533	0.12970142046865582	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2397	0.1227375858126206	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2291	0.11730989115424023	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5555	85.27647	1
CGTAGGG	655	76.31105	2
ACGGGAT	565	75.94595	4
TACGGGT	150	75.44521	3
AGTAAGG	1480	74.28032	1
ACGGGTA	255	73.9659	4
AACGAGG	755	73.11702	1
AGGGATG	2795	72.63271	5
TACGACC	405	71.93943	6
AGACGGG	1235	71.7817	2
AGTAGGG	3060	71.3481	2
TAGCGGG	915	71.11821	2
TAAGGGA	1725	71.07157	3
ATAGAGG	1130	70.98229	1
GTACGGG	480	70.731705	2
CGAAGGG	1880	70.7317	2
CGAGGGA	985	69.89214	3
AAGAGGG	6715	69.660805	2
AGTACGG	245	69.32916	1
GGGGGGA	35630	69.16353	6