SRR3126899.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126899.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2036305
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14347	0.7045604661384223	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4723	0.23193971433552438	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2966	0.14565597982620482	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	2801	0.1375530679343222	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	2799	0.13745485082048123	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	2728	0.13396814327912568	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2587	0.12704383675333508	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2418	0.11874449063377047	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2232	0.10961029904655738	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5920	85.62027	1
ACGGGAT	520	80.43399	4
CGTAGGG	570	79.14971	2
AGGGATG	2525	75.9367	5
AGTAAGG	1220	73.68109	1
AGTAGGG	3185	73.185524	2
GGTAAGG	1160	72.623566	1
CGAAGGG	1950	72.30021	2
GACCGAT	145	71.30297	8
GTAGGGC	910	71.26736	3
TATAGGG	1710	70.63012	2
ATAGCGG	410	70.021034	1
TAAGGGA	1625	69.6974	3
ATAGAGG	1365	69.64681	1
AGGGCAC	1265	69.09957	5
GGGCGAT	735	69.054085	6
GGGGGGA	36720	68.77774	6
ATGAGGG	3205	68.7698	2
GTAAGGG	3215	68.55589	2
AGGGCAT	1680	67.97511	5