SRR3126896.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126896.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1722863
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12388	0.7190356981373446	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4252	0.2467984976170479	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2531	0.1469066315777865	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2145	0.12450206429646467	No Hit
CCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG	2129	0.12357337756977774	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2075	0.12043905986720942	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2005	0.11637605543795414	No Hit
CTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC	1890	0.10970111958989194	No Hit
GCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG	1862	0.10807591781818984	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5055	83.30661	1
CGTAGGG	590	81.24016	2
ATAGCGG	430	77.690414	1
AGGGATG	2365	77.29541	5
CGAAGGG	1735	73.39939	2
GTAGGGC	890	73.391785	3
ACGGGTA	180	73.09845	4
AGTAGGG	2675	73.078926	2
TAGGGCG	255	71.8699	4
TAGCGGG	950	71.72442	2
ACGGGAT	540	71.35802	4
AGAGGGC	2020	70.95306	3
GTAAAGG	1150	70.373344	1
TAGAGGG	3060	70.33422	2
CGAGGGA	865	70.080345	3
AGGGCAT	1415	69.74259	5
GAATAGG	1070	69.47856	1
ATAGAGG	1085	69.385345	1
ATAGGGC	910	69.1968	3
AAGGGTA	980	69.04926	4