SRR3126894.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126894.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1115874
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5569	0.49907068360764745	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	3556	0.3186739721509776	No Hit
CTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC	3107	0.27843645429501895	Illumina Single End Adapter 1 (95% over 21bp)
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2938	0.2632913751911058	No Hit
CCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG	2743	0.24581628391735985	No Hit
GCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG	2294	0.2055787660614012	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2165	0.1940183210649231	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2119	0.18989599184137276	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCAGCAAGA	2032	0.1820994126577015	No Hit
CGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCT	1639	0.14688038255215194	No Hit
GCAGAGAATATCAACTGTCTCTTATACACATCTGACGCCAGCAAGATCGT	1308	0.11721753531312674	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTAAGG	720	84.321495	1
CGTTTTT	2940	83.08088	1
ATAGCGG	205	82.6475	1
TCCGCTA	680	82.36052	1
AAGGGTA	495	81.65272	4
CGCTACG	675	81.46282	3
GCTACGA	680	80.86383	4
CGTAGGG	310	80.4123	2
CTACGAC	685	80.27358	5
CGAAGGG	945	79.63362	2
AGGGTAT	495	78.80437	5
TCACGGG	120	78.38935	2
AGGGCAT	900	78.329636	5
AGGGATG	1900	78.16473	5
ACGGGTA	145	77.78943	4
AACGAGG	425	77.515785	1
TACGACC	710	77.44705	6
AGACGGG	640	77.16451	2
TGTAGGG	755	76.62429	2
AGAGGGC	1135	76.60432	3