SRR3126888.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126888.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1864989
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10130	0.5431667425384279	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4746	0.2544787127430778	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2778	0.1489553021492352	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2735	0.1466496585234551	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2605	0.1396791080269106	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	2312	0.12396855960008343	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2083	0.11168966680232431	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	1868	0.1001614486734238	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGG	340	84.41353	1
CGTTTTT	4160	84.260506	1
TACGGGT	255	79.25228	3
TAGCGGG	885	78.63422	2
AGGGCGA	865	78.24019	5
CGAAGGG	1735	76.42629	2
AGGGCAT	1790	74.3048	5
AAGGGTA	1300	73.02835	4
AAGGGCA	2820	71.99762	4
AGTAGGG	2965	71.68146	2
ACGGGTA	210	71.61668	4
ATAGGGC	1290	71.04416	3
CGTAGGG	505	70.76448	2
TAAGGGA	1660	70.497665	3
AGGGATG	2195	70.44413	5
AGGGCAC	1340	70.146935	5
AGAGGGT	1855	69.67424	3
GGGGGGA	31175	69.06171	6
AGGGTAT	1060	68.724144	5
AAGAGGG	6365	68.70331	2