SRR3126880.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126880.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2385715
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27812	1.1657721060562556	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4174	0.1749580314496912	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3188	0.13362870250637648	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	2965	0.12428139991574852	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	2711	0.11363469651655793	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	2654	0.11124547567500728	No Hit
CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	2557	0.1071796086288597	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	2502	0.1048742200975389	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2500	0.10479038778730904	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10005	87.0663	1
ACGGGAT	705	76.2437	4
TAAGGGA	2190	76.00092	3
AGGGATG	3640	74.74922	5
ACGGGTA	200	73.0836	4
CGTAGGG	645	72.37086	2
GTAGGGC	1160	71.53902	3
AGAGGGC	3410	70.380394	3
ATAGGGA	2415	70.09154	3
TAGGGCA	1320	70.011665	4
AAGGGAC	2230	69.98603	4
AGTAAGG	1655	69.57084	1
AAGGGTA	1560	69.21483	4
TAGAGGG	4265	69.20597	2
AAGGGCG	1255	69.129326	4
GAATAGG	1605	69.09209	1
ATAGGGC	1495	68.75489	3
CGAAGGG	2325	68.14039	2
AGTAGGG	3960	68.10658	2
GTAAGGG	4135	67.960884	2