SRR3126873.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126873.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2298588
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15277	0.6646254135147317	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4223	0.18372148466797877	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4110	0.1788054231554328	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	3006	0.13077593722755013	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2989	0.13003635275221137	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2879	0.12525080614707812	No Hit
GCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	2730	0.11876856574557947	No Hit
CTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC	2645	0.11507064336888559	No Hit
CCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	2314	0.1006704985843483	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5575	82.640366	1
TAGCGGG	1105	77.02643	2
CGTAGGG	675	75.93573	2
ATAGCGG	475	73.31495	1
AAGGGTA	1680	72.73473	4
AGGGATG	2885	72.00359	5
AGGGCAT	2105	71.892166	5
ATAGGGC	1480	71.449394	3
TAGGGCG	445	70.76077	4
AGTAGGG	3795	70.381744	2
AACGAGG	975	69.987076	1
GGTAAGG	1310	69.69231	1
AGGGTAC	1145	69.367966	5
AGAGGGC	3015	68.898964	3
ACGGGTA	330	68.36047	4
AGTAAGG	1510	67.941315	1
AGAAGGG	7970	67.61604	2
AAGGGTC	1350	67.18948	4
AAGGGCG	1025	66.94324	4
CGAAGGG	2215	66.87446	2