SRR3126872.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126872.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2406764
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15913	0.6611782459767555	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4290	0.1782476387381563	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4288	0.17816453960587744	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3193	0.13266776468320118	No Hit
GCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	3128	0.1299670428841382	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2980	0.12381770709550251	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2893	0.12020289484137206	No Hit
CTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC	2746	0.1140951086188758	No Hit
CCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG	2433	0.10109009441723409	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5820	83.27558	1
ACGGGTA	285	77.503944	4
CGTAGGG	670	73.6506	2
TACGGGT	175	72.50826	3
TAGGGTC	715	71.64589	4
AGGGAAT	2890	71.391495	5
AGGGATG	2770	71.260574	5
AGTAGGG	3915	71.18438	2
AAGGGTA	1775	70.69419	4
TAGGGCG	515	70.26747	4
GAATAGG	1400	69.90991	1
ATAGGGC	1460	69.85036	3
GTAGGGT	845	69.52085	3
CGAAGGG	2220	69.223976	2
AGGGTAC	1295	68.95466	5
AGGGCAT	2090	68.58566	5
TAGCGGG	1090	68.12278	2
AATAGGG	3345	67.71934	2
AGAGGGC	3215	67.38787	3
AAGGGAC	2365	67.36578	4