SRR3126870.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126870.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1251114
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6964	0.5566239367475706	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5800	0.46358685139803407	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3966	0.31699749183527637	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3052	0.24394259835634485	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTG	2875	0.22979520651195653	No Hit
CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTG	2767	0.22116289962385524	No Hit
CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC	2422	0.19358747484242042	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2233	0.17848093778824312	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1516	0.12117201150334822	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAGTTGTGG	1497	0.11965336492118224	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1387	0.11086120049811608	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGGT	105	93.99605	3
CGTTTTT	2965	83.459305	1
GGTAAGG	785	82.703354	1
TAGCGGG	545	79.374176	2
TAGGGCG	185	78.75344	4
AATGCGG	245	78.72841	1
CGAAGGG	1140	78.36762	2
GCTACGA	780	78.33004	4
TCCGCTA	795	78.112495	1
CGTAGGG	310	77.35642	2
AGAGGGC	1340	77.160934	3
AGGGCGC	250	77.07675	5
TAGGGTA	305	77.04594	4
CGCTACG	810	76.58937	3
AGGGATG	1950	76.40191	5
ACGGGAT	445	76.04175	4
GTACGGG	285	75.89285	2
AGGGCGA	545	75.88671	5
AGACGGG	670	75.79436	2
TGTAGGG	745	75.73784	2