SRR3126857.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126857.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1743760
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8349	0.4787929531586916	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6721	0.38543148139652245	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	6264	0.35922374638711746	No Hit
CTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC	5592	0.320686332981603	No Hit
GCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	4545	0.2606436665596183	No Hit
CCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	3988	0.22870119741248796	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	3696	0.21195577373032984	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3530	0.20243611506170575	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTT	2133	0.12232187915768224	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTAGGAAT	2082	0.1193971647474423	No Hit
CGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	1825	0.1046588980134881	No Hit
AGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	1815	0.10408542459971555	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTAGGG	600	86.15715	2
ATAGCGG	285	85.85816	1
CGCTACG	1215	85.48027	3
CGTTTTT	3995	84.572815	1
CTAACGG	175	83.3579	1
GCTACGA	1230	82.909546	4
CGAAGGG	1500	82.397575	2
AGGGATG	3265	82.1893	5
AGTAAGG	1050	82.01341	1
CTACGAC	1245	81.91299	5
TCCGCTA	1300	80.358665	1
GGTAAGG	975	79.152084	1
CGGGATA	215	78.69124	5
CGACCAA	1210	78.45639	8
TACGACC	1295	78.38741	6
AGTACGG	175	77.97997	1
TAGCGGG	670	77.85707	2
GCGTAGG	305	77.14242	1
GGATGGC	2005	77.1159	7
TAACGGG	575	76.8263	2