SRR3126853.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126853.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1217032
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6865	0.5640771976414753	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4836	0.3973601351484595	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3806	0.3127280137251937	No Hit
GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	3212	0.26392075146750454	No Hit
CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	2820	0.2317112450617568	No Hit
CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC	2554	0.20985479428642798	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2321	0.19070985808097074	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2059	0.16918207573835364	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1640	0.13475405741180183	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTT	1341	0.11018609206660138	No Hit
GCAGAGAATATCAACTGTCTCTTATACACATCTGACGCCTCCAGGTTCGT	1339	0.11002175785024551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGGT	15	6.832827E-4	94.239586	3
ATAGCGG	215	0.0	89.93044	1
CGTAGGG	290	0.0	87.74031	2
AGTAAGG	660	0.0	85.743	1
CGCTACG	820	0.0	85.62011	3
CGTTTTT	3035	0.0	84.21742	1
GCTACGA	845	0.0	83.6446	4
ACGGGAT	430	0.0	83.281494	4
AGGGATG	2060	0.0	83.266	5
CGAAGGG	1165	0.0	82.5102	2
TAACGGG	360	0.0	82.45964	2
TCCGCTA	880	0.0	81.99174	1
CTACGAC	860	0.0	81.96621	5
GCGTAGG	150	0.0	81.74166	1
GGTAAGG	790	0.0	79.99062	1
TACGGGA	195	0.0	79.74119	3
ATCGCGG	160	0.0	79.580215	1
TACGACC	880	0.0	79.03529	6
ACGACCA	865	0.0	78.77601	7
AACGAGG	390	0.0	78.59775	1