SRR3126814.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126814.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1421620
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45250	3.1829884216597963	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT	3945	0.277500316540285	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT	3746	0.26350220171353805	No Hit
CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	3470	0.24408773089855235	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3284	0.23100406578410543	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	2352	0.16544505564074788	No Hit
CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	1977	0.13906669855516945	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTC	1821	0.12809330200756883	No Hit
CGTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC	1550	0.10903054262039083	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	13830	90.60805	1
ACGGGTC	175	72.74369	4
TAGGGCA	580	72.34885	4
CGGGAAT	230	71.510796	5
ACGGGAT	265	71.16783	4
ATAGCGG	325	71.13341	1
ATAGGGC	805	70.86946	3
TAGCGGG	720	70.06819	2
ATGTAGG	440	69.698204	1
CGTAGGG	325	69.63499	2
GTACGGG	285	69.48228	2
ATAGGGA	1075	69.29761	3
AGGGACT	1940	68.793594	5
ATAGAGG	1010	68.66838	1
GGGCGAT	645	68.48564	6
AGGGATG	1840	68.446045	5
GAGGGTA	635	68.309906	4
AGTAGGG	2195	68.09173	2
GCATAGG	375	67.93966	1
ACGGGTA	140	67.35527	4