SRR3126813.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126813.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1422793
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43690	3.0707207583956344	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT	4045	0.28429996492813786	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT	3776	0.2653934901282196	No Hit
CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	3447	0.24226995775211152	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3302	0.2320787352763192	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	2325	0.16341098107735982	No Hit
CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	2050	0.14408280051982264	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTC	1731	0.12166211107307949	No Hit
CGTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC	1503	0.10563729228355775	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	13485	89.672104	1
TAGGGCG	290	82.65301	4
ATAGGGC	1045	78.25633	3
GTAGGGC	735	74.81437	3
AGGGCAT	1260	74.22822	5
ACGGGAT	280	73.85521	4
TAGGGCA	905	70.62798	4
GGTAAGG	720	69.92403	1
ACGGGTA	175	69.826744	4
ATAGGGA	1145	69.36936	3
ATGAGGG	2080	68.284195	2
AGGGATG	1990	67.545975	5
AGGGTAC	565	67.37877	5
TAGCGGG	810	67.35185	2
TAGGGTC	350	67.141106	4
TGTAGGG	925	66.60489	2
GGGCGAT	650	66.52134	6
AGGGACT	1795	65.98155	5
TAAGGGA	1060	65.62092	3
CGTTTCT	555	65.27891	1