SRR3126812.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126812.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1495244
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45568	3.0475293664445404	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT	4160	0.2782154618242909	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT	3899	0.26076011674348804	No Hit
CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	3729	0.2493907348900915	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3304	0.22096728025660026	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	2377	0.158970709797197	No Hit
CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	2151	0.1438561198038581	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTC	1922	0.12854089366016516	No Hit
CGTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC	1744	0.1166364820724912	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	13820	89.70442	1
ATAGGGC	1285	76.80382	3
CGTAGGG	425	75.194595	2
TAGGGCA	875	73.58329	4
AGGGATG	1830	69.082466	5
AAGGGTA	875	68.74935	4
AGTACGG	240	68.637726	1
AGGGAAT	1640	68.488976	5
ATAGAGG	1060	68.378716	1
GGGCGAT	640	68.29197	6
AGGGCAT	1160	68.06407	5
TAGGGCG	380	68.02143	4
ATAGGGA	1310	67.80429	3
TAGAGGG	2745	67.79841	2
AGATAGG	855	67.7088	1
AGGGACT	1855	67.39139	5
GTACGGG	385	67.13803	2
GATAGGG	2210	66.98614	2
ACGGGAT	360	66.57855	4
AGAGGGC	2230	66.38536	3