SRR3126796.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126796.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1173596
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5671	0.48321568921502794	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4305	0.3668212911427783	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3322	0.2830616327935678	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2404	0.20484050729552586	No Hit
GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	2367	0.20168780398024533	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	2304	0.19631968752449735	No Hit
CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC	2163	0.1843053316473471	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	1654	0.1409343590128119	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1238	0.1054877487653332	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACGT	15	6.9062307E-4	93.98637	7
CGTTTTT	2805	0.0	85.273796	1
CGAAGGG	965	0.0	83.5434	2
AGGGCAT	1135	0.0	83.22141	5
TAGCGGG	495	0.0	82.86239	2
AAGGGCA	1285	0.0	82.55109	4
AGGGATG	1925	0.0	81.29211	5
GGTAAGG	570	0.0	81.11324	1
ATCGGGT	35	3.7825885E-8	80.82145	3
GTAGGGC	495	0.0	80.005066	3
CGTAGGG	230	0.0	79.94295	2
CACGGGT	65	0.0	79.78527	3
TAACGGG	375	0.0	79.20502	2
AAGGGAC	870	0.0	78.5764	4
AACGAGG	355	0.0	78.40869	1
GTAAAGG	820	0.0	78.24662	1
TCCGCTA	670	0.0	78.16075	1
AGGGTAC	410	0.0	77.93991	5
ACGGGTC	115	0.0	77.89313	4
ACGGGAT	365	0.0	77.500015	4