SRR3126795.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126795.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1172203
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5303	0.4523960440299163	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4292	0.36614818423088835	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3315	0.2828008459285635	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	2387	0.20363367095972285	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2362	0.2015009345650881	No Hit
GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	2335	0.19919757925888262	No Hit
CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC	2155	0.18384187721751266	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	1601	0.13658043871240733	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTACATCA	1279	0.10911079394951215	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	2820	0.0	85.238815	1
TCCGCTA	705	0.0	84.73839	1
GCGTAGG	80	0.0	82.31968	1
GTAACGA	40	1.036824E-9	82.24243	8
CGAAGGG	935	0.0	81.95975	2
GGTAAGG	685	0.0	81.7188	1
GGGCGAT	580	0.0	81.027016	6
CGGGTAC	70	0.0	80.564	5
CGCTACG	735	0.0	80.564	3
AGGGCAT	1120	0.0	80.1444	5
GCTACGA	750	0.0	78.95273	4
AGGGCTA	530	0.0	78.91725	5
CGAGGGA	580	0.0	78.59621	3
TAGCGGG	575	0.0	78.49247	2
AGGGATG	2055	0.0	78.44046	5
GGGTACG	115	0.0	77.64503	6
GGATGGC	1150	0.0	77.64502	7
CGAGGGC	370	0.0	77.47935	3
GAAGGGC	1245	0.0	77.00495	3
GCGAAGG	460	0.0	76.69535	1