SRR3126774.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126774.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1221765
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6205	0.5078718084083272	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5367	0.43928251341297225	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4156	0.34016361575262016	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2829	0.23155025720985623	No Hit
GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG	2809	0.22991328119564727	No Hit
CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC	2640	0.21608083387558166	No Hit
CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG	2639	0.2159989850748712	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	1919	0.15706784856334893	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTTTCCGAA	1838	0.15043809570580266	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGCGTA	15	6.9044094E-4	93.992836	8
CGTAGGG	420	0.0	90.68791	2
CGTTTTT	3085	0.0	87.57489	1
TAGCGGG	495	0.0	84.54706	2
AGGGTAC	385	0.0	84.22735	5
CGCTACG	865	0.0	84.213234	3
AGGGATG	2285	0.0	83.70916	5
CGGGACG	45	2.7284841E-11	83.549194	5
GCTACGA	865	0.0	83.12661	4
TAACGGG	280	0.0	82.29088	2
TCCGCTA	900	0.0	81.06103	1
AGGGCAT	1085	0.0	80.998436	5
AATGCGG	250	0.0	80.95643	1
GGATGGC	1800	0.0	80.93828	7
ATTGCGG	105	0.0	80.68747	1
AGTAAGG	670	0.0	79.38282	1
CGGGTAT	190	0.0	79.15187	5
TACGGGA	425	0.0	78.511665	3
GCGTAGG	300	0.0	78.446144	1
CGACCAA	875	0.0	78.41688	8