SRR3126773.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126773.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1277076
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6484	0.507722328193467	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5599	0.43842339845083617	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4196	0.32856306124302703	No Hit
GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG	3239	0.25362625247048726	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2973	0.2327974216099903	No Hit
CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG	2805	0.2196423705402028	No Hit
CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC	2732	0.21392618763487842	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2028	0.15880025934243538	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTTTCCGAA	1499	0.11737750924768768	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTT	1351	0.10578853568620818	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1284	0.10054217603337623	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGATG	2460	85.970024	5
CGTTTTT	3220	85.93828	1
AGTACGG	160	85.29885	1
CGTAGGG	445	83.432785	2
CGAAGGG	1055	83.30265	2
TACGGGA	390	83.14844	3
CGCTACG	955	82.183136	3
GCTACGA	955	82.183136	4
TAGGGCG	245	80.566185	4
CGACCAA	980	80.086624	8
TCCGCTA	1010	79.678276	1
GCGTAGG	260	79.64243	1
CTACGAC	1000	78.95487	5
AATGCGG	245	78.755875	1
TAGCGGG	575	78.46446	2
TACGACC	1005	78.09443	6
GGATGGC	1710	77.77857	7
CGGGATA	230	77.647125	5
AGGGCAT	1025	77.02914	5
CTAGCGG	110	77.00962	1