SRR3126748.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126748.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2284400
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14740	0.6452460164594642	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	7619	0.33352302573980036	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5156	0.22570478024864296	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3418	0.14962353353178076	No Hit
GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2785	0.1219138504640168	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2772	0.12134477324461565	No Hit
CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2400	0.10506040973559798	No Hit
CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2300	0.10068289266328138	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5230	82.79126	1
CGTAGGG	680	75.57031	2
TAGGGCA	1060	74.72003	4
AGTAGGG	3560	74.69005	2
AGGGCAT	1915	74.6	5
AAGGGAC	1910	74.29623	4
GAATAGG	1410	74.26383	1
AGGGATG	2885	73.46234	5
TAGTAGG	970	73.425804	1
AGTAAGG	1465	72.11969	1
GTACGGG	495	71.43149	2
AGAGGGC	2925	71.40218	3
AGACGGG	1480	71.35426	2
ATAGCGG	455	70.49219	1
AGGGTAT	1385	69.89587	5
ACGGGAT	550	69.431404	4
CGAAGGG	2250	69.35521	2
AAGAGGG	7465	69.2804	2
ATAGGGC	1470	68.953255	3
GGGGGGA	31695	68.94396	6