SRR3126747.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126747.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2303343
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13951	0.6056848676033053	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	7655	0.33234303358205874	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5000	0.21707578940696198	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3450	0.14978229469080376	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2902	0.12599078817180073	No Hit
GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2835	0.12308197259374744	No Hit
CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2423	0.10519492754661378	No Hit
CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2344	0.10176513007398376	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5005	81.70117	1
TAGGGCG	505	75.380516	4
CGAAGGG	2215	73.45359	2
AGGGATG	2955	72.99963	5
CGTAGGG	625	72.97975	2
GGTAAGG	1250	72.65406	1
AGTAGGG	3630	72.28334	2
GGGCGAT	1060	72.26819	6
AGTAAGG	1265	71.79256	1
AGGGCAT	1965	71.51121	5
GAATAGG	1480	70.90156	1
TGTAGGG	1820	70.276184	2
ATAGGGC	1580	70.197296	3
AGAGGGC	3030	70.10698	3
TAGGGCA	1290	69.948265	4
GTAAGGG	3315	69.78984	2
AGACGGG	1455	69.16103	2
ATAGCGG	490	69.143135	1
TAAGGGA	1655	68.71995	3
TAACGGG	790	68.45125	2