SRR3126735.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126735.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2534831
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18258	0.7202847053708906	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5097	0.20107849399032912	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3701	0.1460057889460875	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	3011	0.11878503931820306	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	2722	0.10738388476391524	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	2692	0.10620037391052894	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	2666	0.10517466450426084	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2648	0.10446455799222906	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7130	83.50189	1
CGTAGGG	810	77.2135	2
ATAGCGG	535	73.01627	1
CGAAGGG	2345	72.99365	2
GGTAAGG	1420	72.917145	1
AGTAAGG	1520	72.76451	1
AGGGCAT	2240	72.59348	5
ACGGGAT	700	71.838165	4
GGGCGAT	1305	70.585434	6
AGGGCGA	1350	70.321335	5
AACGAGG	945	70.22352	1
AAGGGCA	3765	70.0273	4
AGGGATG	2950	69.14125	5
TACGGGT	185	68.59012	3
GAGGGAT	3200	68.439285	4
ACGAGGG	2325	68.36288	2
ATAGAGG	1930	68.2804	1
AGTAGGG	3910	67.951385	2
GTAAGGG	3715	67.8473	2
CTACGAC	520	67.784035	5