SRR3126724.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126724.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1050241
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5279	0.5026465354142525	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4350	0.4141906476703918	No Hit
GCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	2938	0.2797453155989911	No Hit
CCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	2817	0.2682241504568951	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2772	0.26393941961892553	No Hit
CTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC	2677	0.25489387673876757	TruSeq Adapter, Index 14 (95% over 21bp)
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2323	0.2211873274800736	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1585	0.15091774173737266	No Hit
GCAGAGAATATCAACTGTCTCTTATACACATCTGACGCCTAATGACTCGT	1405	0.13377881838549438	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATTGCGG	70	94.3454	1
GCGTAGG	90	89.10398	1
CGTTTTT	2835	85.526505	1
AGGGCAT	830	84.927155	5
TAGGGCG	145	84.5209	4
CGAAGGG	820	83.92623	2
GTAGAGG	645	83.375	1
AGCGGGT	160	82.48914	3
TAACGGG	370	81.53367	2
TCGAAGG	140	80.867485	1
ATAGGGC	580	80.45739	3
AGTACGG	100	80.19358	1
TAGCGGG	595	80.01347	2
CGTAGGG	230	79.92737	2
TTAGCGG	195	79.83072	1
GACCGAC	130	79.52666	8
TAAGGGT	350	79.45892	3
AGTAAGG	490	78.94206	1
ACTACGG	60	78.62116	1
CTAGCGG	90	78.62116	1