SRR3126722.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126722.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1089043
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5405	0.4963073083431967	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4274	0.3924546597333622	No Hit
GCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	3151	0.28933660103411896	No Hit
CCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG	3108	0.2853881802646911	No Hit
CTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC	2995	0.27501209777759006	TruSeq Adapter, Index 14 (95% over 21bp)
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2650	0.24333290788334347	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2265	0.20798076843614072	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTAATGAC	1599	0.1468261583794212	No Hit
GCAGAGAATATCAACTGTCTCTTATACACATCTGACGCCTAATGACTCGT	1532	0.14067396787821967	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1515	0.13911296431821332	No Hit
AGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCT	1099	0.10091428896746961	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTAGCGG	120	90.20125	1
CGAAGGG	845	85.65078	2
AAGGGTA	610	83.9777	4
CGTTTTT	2770	82.90982	1
CGTAGGG	250	82.71418	2
TAGCGGG	645	82.33529	2
AGGGTAC	345	81.73338	5
CTAACGG	110	81.28808	1
GGGTACG	70	80.565765	6
AATGCGG	235	80.104706	1
ATAGCGG	130	79.64257	1
AGCGGGT	320	79.30692	3
GATTAGG	185	78.85983	1
TAAGGGT	370	78.75121	3
AGGGCAT	885	78.593346	5
GAGGGTA	425	78.51212	4
TAACGGG	330	78.32782	2
AGGGTAT	335	77.15875	5
GCGTAGG	110	77.00976	1
ACGGGTC	110	76.90368	4