SRR3126718.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126718.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1542347
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11678	0.7571577602186798	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	3803	0.24657226940500418	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2648	0.17168639741899844	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2418	0.15677405927459903	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2231	0.1446496800006743	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	2201	0.1427045924166222	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	2025	0.13129341192351657	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	1897	0.12299437156489428	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1700	0.11022162976295218	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5015	85.40825	1
ATAGCGG	230	82.038376	1
TAAGGGA	1310	76.28491	3
AGGGCAT	1410	75.32234	5
CGAGGGA	845	75.309746	3
AGGGATG	1960	75.04517	5
AGTAAGG	990	74.80823	1
AGTAGGG	2480	74.50896	2
CGAAGGG	1455	74.19021	2
GGTAAGG	900	72.85464	1
CGTAGGG	460	72.756966	2
ACGGGAT	370	72.61849	4
GCGTAGG	215	72.40364	1
AAGGGAC	1485	72.373985	4
AGGGTAT	720	71.1424	5
AAGGGTA	925	70.834885	4
GAGGGTA	680	70.01427	4
AGGGCGA	860	69.39685	5
TAGGGCA	985	69.39144	4
TAGAGGG	2840	69.37964	2