SRR3126717.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126717.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1547443
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11030	0.712788774772318	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	3745	0.24201214519694747	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2695	0.17415827271182202	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2393	0.15464220653038593	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	2196	0.1419115275974624	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2129	0.1375818043055544	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	2104	0.1359662359130514	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	1926	0.12446338895843014	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1644	0.10623977749099645	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4600	86.015915	1
CGTAGGG	435	78.91062	2
ACGGGAT	325	78.08356	4
AGGGCAT	1425	77.170296	5
ATAGCGG	235	76.07752	1
GTAGGGT	540	74.84347	3
AGTACGG	235	74.075485	1
CGAAGGG	1400	73.2201	2
GACCGAT	90	73.10292	8
AGTAGGG	2550	73.02253	2
GGTAAGG	900	72.66293	1
TAGCGGG	720	72.49238	2
AGTAAGG	865	71.7957	1
GTAGGGC	840	71.61102	3
AGGGATG	2150	71.25713	5
TAGGGTC	465	70.74476	4
TGTAGGG	1300	70.53313	2
GGGCGAT	775	69.734116	6
TAGAGGG	2710	69.40529	2
ATAGGGC	915	69.336494	3