SRR3126716.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126716.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1629107
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11614	0.7129059048914528	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	3787	0.23245864145203476	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2758	0.16929520283198096	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2413	0.1481179566474148	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	2382	0.14621507365691755	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	2238	0.13737587524944647	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2235	0.13719172528262416	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	2122	0.13025540986565032	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1834	0.11257701305070814	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4895	84.89542	1
ATAGCGG	325	79.64446	1
CGTAGGG	510	78.32939	2
ACGGGAT	355	75.46099	4
TAGCGGG	835	75.421364	2
GTACGGG	400	75.19622	2
AGGGCAT	1330	74.560165	5
TAAGGGA	1410	74.3296	3
CTAGCGG	185	73.773865	1
GGTAAGG	975	73.36944	1
AGTAGGG	2470	72.87488	2
AGTAAGG	995	72.84066	1
ATAGGGC	1180	71.29303	3
TAACGGG	530	70.93983	2
TGTAGGG	1215	70.78657	2
AGGGATG	2055	70.66798	5
GTAAGGG	2490	70.21334	2
TAAGAGG	1140	69.768295	1
AGGGCGA	750	69.5565	5
GGGGGGA	27915	69.498924	6