SRR3126708.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126708.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1494436
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8213	0.5495718786217677	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4764	0.3187824704436992	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4514	0.3020537513817922	No Hit
GCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTG	3547	0.23734706605033604	No Hit
CCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTG	3285	0.21981536847345753	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3220	0.21546590151736172	No Hit
CTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC	3076	0.2058301593377033	Illumina Single End Adapter 1 (95% over 21bp)
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2191	0.14661049385855265	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTT	1920	0.12847656239544553	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCAAACAGT	1711	0.11449135325969127	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1653	0.11061029043732885	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATTGCGG	150	90.96335	1
ACGGGAT	550	86.30552	4
GGGTACG	175	85.93931	6
CGTAGGG	400	85.80878	2
CGTTTTT	3635	85.686676	1
ACGGGTA	220	85.45102	4
TACCGGG	90	83.58846	2
TAGCGGG	690	80.40846	2
GGTAAGG	775	79.52969	1
CGGGATA	280	78.8896	5
TAGGGCG	245	78.64982	4
CTACGAC	945	78.57876	5
CGCTACG	945	78.57876	3
CGAAGGG	1520	78.57041	2
AGGGATG	2715	78.41666	5
AAGGGCA	1695	78.19146	4
CGAGGGA	765	78.02292	3
AGGGCAT	1310	77.49299	5
GCTACGA	960	77.35098	4
AGACGGG	950	76.21948	2