SRR3126675.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126675.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1015566
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5685	0.559786365435629	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4505	0.4435950002264747	No Hit
GCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	3316	0.32651742968945396	No Hit
CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	3072	0.3024914185784085	No Hit
CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	2944	0.2898876094709748	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2219	0.21849884694840116	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2187	0.21534789467154278	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCCTATCGT	1980	0.19496517213061484	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	1740	0.1713330300541767	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1288	0.12682582914355148	No Hit
GCAGAGAATATCAACTGTCTCTTATACACATCTGACGCCCTATCGTTCGT	1211	0.1192438502273609	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	1081	0.10644310660262357	No Hit
AGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	1021	0.10053507108351402	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTACGG	95	89.18596	1
GGTAAGG	495	86.5334	1
CGTTTTT	2915	83.48329	1
ACGGGAT	170	82.93449	4
AGGGCAT	795	82.76062	5
GTGTAGG	315	82.186356	1
CGAGGGT	185	81.29074	3
AGAGGGC	850	80.17	3
TAACGGG	275	78.67381	2
TAGCGGG	425	78.57321	2
ATAGCGG	210	78.450615	1
GGGTACG	60	78.32702	6
CGAAGGG	850	78.019875	2
CGGGTAA	115	77.645905	5
GCATAGG	255	77.527664	1
TCGAAGG	140	77.329895	1
GACCGAT	110	76.902885	8
GAATAGG	700	76.657455	1
TCACGGG	135	76.64679	2
CGTAGGG	290	76.22632	2