SRR3126667.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126667.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1521228
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7170	0.4713297414983158	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5784	0.38021913874843216	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3622	0.23809711627711294	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3475	0.22843387053091319	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3439	0.22606736136857852	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3229	0.21226272458829315	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2555	0.16795641416013904	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2342	0.15395456828299242	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	1554	0.10215431217411197	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1531	0.10064237576484263	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGGGTA	165	85.73119	4
CGCTACG	445	84.767914	3
CGTAGGG	400	83.69784	2
CGTTTTT	3795	83.67693	1
CGAAGGG	1335	83.35787	2
TCCGCTA	460	82.06058	1
GCTACGA	465	81.12199	4
TAGGGCG	170	80.436035	4
ATAGCGG	270	80.388985	1
AGTACGG	215	79.007164	1
AGGGCAT	1600	79.00618	5
AGGGATG	2015	78.126526	5
CTACGAC	485	77.513435	5
TAGGGCA	870	77.50297	4
AGAGGGC	1870	77.158066	3
GTAGCGG	265	76.56407	1
AGGGCGA	680	76.01732	5
TCGAGGG	475	75.44593	2
AGGGTAC	500	75.188034	5
AGCGGGA	880	75.014786	3