SRR3126666.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126666.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1524350
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6958	0.45645685046085216	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5568	0.3652704431396989	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3604	0.2364286417161413	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3432	0.22514514383179715	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3378	0.2216026503099682	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3001	0.19687079738905108	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2543	0.16682520418539049	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGTATTCA	2492	0.1634795158592187	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2246	0.14734148981533113	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	1636	0.10732443336504084	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3775	84.38124	1
CGAAGGG	1285	83.41876	2
CGCTACG	425	79.616776	3
ATAGCGG	285	79.24476	1
ATTGCGG	185	78.84318	1
AGGGATG	2045	78.82461	5
CGTAGGG	410	77.9753	2
GCTACGA	440	77.97066	4
AGGGCAT	1485	77.535515	5
GCATAGG	365	76.05598	1
AGTAAGG	875	75.28252	1
GTAGCGG	315	74.68504	1
TAGGGCA	850	74.640724	4
AAGGGCA	2100	74.52225	4
TCCGCTA	450	74.23692	1
TAACGGG	330	74.08349	2
AGAGGGC	1935	73.833534	3
AGGGCAA	1345	73.02727	5
AAGGGTG	1165	72.61187	4
TAGAGGG	2515	72.53135	2