SRR3126657.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126657.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1327888
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6218	0.4682623835745183	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5020	0.3780439314159026	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4951	0.37284771004783535	No Hit
CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC	3643	0.27434542672273565	No Hit
GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	3553	0.2675677466774306	No Hit
CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	3471	0.2613925270805971	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2910	0.2191449881315292	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTCTGTAT	2673	0.20129709734555928	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2415	0.18186774788235152	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1459	0.10987372429000035	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTT	1385	0.10430096514163845	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTACGG	120	90.19472	1
GTACGGG	240	84.25845	2
AGGGATG	2220	83.834045	5
AATGCGG	225	83.658875	1
AGTAAGG	625	82.82229	1
TAGGGCG	225	81.46298	4
CGTTTTT	3365	81.390274	1
AGGGTAT	665	81.27452	5
CGAAGGG	1055	81.12883	2
AGGGCAT	1190	80.96272	5
CGAGGGA	635	79.93339	3
TAGCGGG	625	79.759445	2
AGGGCGC	295	79.65741	5
ATAGAGG	915	78.68735	1
GAGTAGG	725	78.538376	1
CTACGAC	935	78.41356	5
AAGGGCA	1580	78.23064	4
CGTAGGG	355	78.15917	2
GGGTACG	145	77.78958	6
GGCGATT	115	77.64866	7