SRR3126654.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126654.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1896419
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35426	1.868047092968379	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3891	0.2051761767837171	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTT	3102	0.16357144702726562	No Hit
CGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCT	2610	0.13762781326278634	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCT	2509	0.13230198600625706	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	2406	0.1268706968238559	No Hit
CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC	1973	0.10403818987259673	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	1913	0.1008743320964407	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	12380	88.92966	1
AGGGATG	2390	74.13372	5
GGTAAGG	1110	72.93609	1
TAGGGCA	1105	72.30345	4
AGTAGGG	3220	72.14701	2
GTACGGG	465	71.80467	2
ATAGGGC	1210	71.46688	3
GCATAGG	410	71.17785	1
ACGGGAT	465	70.74854	4
AGGGAAT	2045	70.09369	5
CGTAGGG	565	69.916245	2
GTAGGGC	1010	69.332565	3
TGTAGGG	1420	69.2158	2
GTAGGGT	715	69.01694	3
ACGGGTA	200	68.146	4
ATGTAGG	600	67.46589	1
TAGGGTA	495	67.41019	4
TAAGGGA	1480	66.68528	3
GGGCGAT	795	66.20995	6
GAGGGAT	1925	65.91821	4