SRR3126653.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126653.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1982325
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36525	1.8425333888237299	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3802	0.19179498820829077	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTT	3233	0.16309131953640296	No Hit
CGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCT	2912	0.14689821295700756	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCT	2645	0.13342918038162258	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	2439	0.12303734251447164	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	2130	0.10744958571374523	No Hit
CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC	2050	0.10341392052261864	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	12590	88.84672	1
TAGGGCA	1100	74.33657	4
CGTAGGG	565	74.02656	2
AGGGATG	2475	73.294106	5
AGGGAAT	2060	72.774704	5
GTAGGGT	720	72.449684	3
ATAGGGC	1315	70.759605	3
GTAGGGC	1100	70.064354	3
AGTAAGG	1205	69.51378	1
AGTAGGG	3425	68.879364	2
GAGGGAT	1990	68.720436	4
GACCGAT	130	68.68584	8
AGGGTAC	840	68.25548	5
ATAGAGG	1525	68.19623	1
TAAGGGA	1725	68.10781	3
GGTAAGG	1085	67.660126	1
AGAGGGC	2890	67.32068	3
TAGCGGG	1020	67.26648	2
GAATAGG	1115	66.26172	1
ATGAGGG	2890	66.1824	2