SRR3126643.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126643.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1576822
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8527	0.5407712474838632	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6274	0.3978889183433513	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4661	0.29559455664621626	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2748	0.17427458520999833	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2701	0.17129390635087538	No Hit
GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	1971	0.12499825598577391	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1914	0.1213833901353482	No Hit
CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	1718	0.1089533251058141	No Hit
CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC	1620	0.10273829259104705	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGCGAT	615	84.81324	6
CGTTTTT	3910	83.22759	1
AGGGATG	4645	82.95525	5
CGTAGGG	370	82.901596	2
ACGGGAT	535	82.02362	4
CGGGATA	335	81.35776	5
AGGGCAT	1540	80.86134	5
ATAGCGG	330	80.149155	1
GGATGGC	3295	80.14874	7
AGGGCGA	595	79.76643	5
AAGGGCA	2030	79.72745	4
CGCTACG	1250	79.649345	3
CGAGGGA	850	79.38289	3
GCTACGA	1260	79.01721	4
AATGCGG	240	78.71791	1
AGTAAGG	1155	78.10453	1
AGGGATT	2050	77.01959	5
CGAAGGG	1430	76.89023	2
CGACCAA	1290	76.49718	8
TAGCGGG	815	76.43066	2