SRR3126642.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126642.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1573215
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8253	0.5245945404792097	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5823	0.37013377065436065	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4630	0.29430179600372486	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2778	0.1765810776022349	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2709	0.1721951545084429	No Hit
GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	2020	0.12839948767333137	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1931	0.12274228252336776	No Hit
CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	1725	0.10964807734480031	No Hit
CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC	1646	0.10462651322292249	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3760	83.85349	1
AGGGATG	4390	83.29076	5
GGGCGAT	565	82.350914	6
TAGGGCG	160	82.24694	4
CGAAGGG	1445	81.36616	2
CGAGGGA	820	80.24092	3
GGATGGC	2935	79.90504	7
AGGGCAT	1465	78.59776	5
AAGGGCA	1945	78.531784	4
GAGGGAT	2810	78.441925	4
CGCTACG	1035	77.64929	3
AGGGTGC	595	77.40888	5
TACGGGT	85	77.40888	3
AATGCGG	280	77.3097	1
AGTAAGG	1140	76.77897	1
AGGGCGA	600	76.76382	5
GATGGCA	2830	76.060776	8
ATAGCGG	285	75.95339	1
GGAATGC	1855	75.75459	7
GGGATGG	3715	75.27311	6