SRR3126641.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126641.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1644880
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8649	0.5258134331987744	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6246	0.37972374884490057	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4724	0.2871942026166043	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2919	0.17745975390302027	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2713	0.16493604396673314	No Hit
GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	2192	0.1332620008754438	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1875	0.11399007830358446	No Hit
CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG	1867	0.11350372063615582	No Hit
CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC	1745	0.10608676620786928	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4100	84.93407	1
AGGGATG	4620	83.20781	5
GACCGAT	125	82.71141	8
ACGGGAT	650	80.253204	4
CGGGATA	370	80.018715	5
AGTACGG	190	79.255684	1
GGATGGC	3145	79.04744	7
TAGGGCG	250	78.9518	4
AGGGCAT	1435	78.598114	5
CGCTACG	1060	78.47298	3
CGAGGGA	855	78.05038	3
GGATGAC	3145	78.00144	7
CGTAGGG	380	77.912964	2
GGAATGC	1940	77.75997	7
AATGCGG	345	77.7481	1
GAGGGAT	3170	77.38629	4
TAGCGGG	765	76.78941	2
GGGCGAT	730	76.60849	6
GGGATGA	3795	76.03427	6
CGAAGGG	1435	75.97817	2