SRR3126640.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126640.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9409573
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	345802	3.6750020431320314	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	44357	0.4714029000040703	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	21390	0.22732168611689393	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT	19235	0.20441947790829615	No Hit
CGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT	19015	0.2020814334508059	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCT	18870	0.20054044960382367	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	15078	0.16024106513653702	No Hit
GAATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT	12774	0.13575536318172993	No Hit
CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTG	11116	0.11813500995209879	No Hit
CGTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC	10046	0.1067636119088507	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTC	9641	0.10245948461210727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	97145	90.616615	1
AGGGACT	23300	71.33971	5
ATAGGGC	4865	71.155876	3
GTTTTTT	128485	68.90807	2
AGTAGGG	13840	68.8107	2
TAGGGCA	3740	67.75119	4
GACTTAA	19635	67.494804	8
GGTAAGG	5425	66.977554	1
AGATAGG	4480	66.799065	1
GGACTTA	20170	66.40352	7
GTAGGGT	2960	65.07855	3
ATAGGGA	5690	65.06038	3
AATAGGG	11165	64.753105	2
ATAGCGG	1815	64.6543	1
AAGGGGC	28855	64.473656	4
GGATAGG	5000	64.376205	1
GTAGGGA	6105	64.34083	3
GTAGGGC	4170	64.04028	3
GATAGGG	11925	63.509483	2
CAGGGAC	21400	63.252728	4