SRR3126637.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126637.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11329293
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	406699	3.589800352060804	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	53487	0.47211242572683043	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	26489	0.2338098237904166	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT	20344	0.1795698990219425	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCT	20330	0.17944632555623727	No Hit
CGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT	19365	0.1709285830986982	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	18630	0.16444097614917366	No Hit
GAATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT	14280	0.1260449350193344	No Hit
CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTG	13475	0.11893946074128367	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	113905	89.97489	1
AGGGACT	28895	70.603966	5
AGTAGGG	16560	69.28169	2
ATAGGGC	6030	67.991646	3
GTTTTTT	152120	67.984024	2
TAGGGCA	4925	67.68651	4
GACTTAA	24585	67.40083	8
GGACTTA	25270	66.18749	7
GGATAGG	6535	66.16925	1
ATAGAGG	7720	65.33769	1
GGTAAGG	6485	64.86552	1
GTAGGGT	3375	64.7792	3
GTAGGGA	7660	64.51049	3
ATAGGGA	7320	64.488014	3
TAGGGAC	5450	64.44456	4
CAGGGAC	26600	63.58006	4
GATAGGG	15770	63.568867	2
AGATAGG	5835	63.543587	1
AAGGGGC	36085	63.493877	4
TAGTAGG	3960	62.856014	1