SRR3126636.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126636.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10878653
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373124	3.429873165363396	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	58320	0.5360957831819804	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	28923	0.26586931304822387	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	22171	0.20380280536570106	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	19863	0.18258694343867757	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	16883	0.1551938461498864	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	16674	0.15327265241386043	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCT	15874	0.14591880079270841	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	11806	0.10852446529915055	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	11761	0.10811081114546074	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	10895	0.10015026676556373	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	110295	90.222855	1
ATAGGGC	5605	71.83092	3
AGGGACT	30195	70.55153	5
AGTAGGG	16395	68.61604	2
TAGGGCA	4620	67.881775	4
GGTAAGG	5955	67.81068	1
GACTTAA	26050	67.76003	8
GTTTTTT	148150	67.74609	2
AGATAGG	5505	67.53342	1
TAGGGAC	5120	66.77096	4
GGACTTA	26790	66.36199	7
AATAGGG	13065	65.9933	2
GTAGGGA	7685	65.93095	3
ATAGGGA	6810	65.620575	3
TAGTAGG	3900	65.24214	1
GGATAGG	6050	64.409386	1
AGTAAGG	6340	64.13876	1
ATAGAGG	7060	64.0716	1
GATAGGG	14765	64.00809	2
TATAGGG	7545	63.84653	2