SRR3126633.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126633.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13222593
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	432926	3.274138438655716	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	72202	0.5460502338686519	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	36072	0.272805795353453	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	24888	0.1882232932678182	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	23342	0.1765311841633483	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	18488	0.13982128921309156	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	18143	0.13721211868201647	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCT	17128	0.12953586335146217	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	128180	89.96394	1
ATAGGGC	6785	72.82449	3
AGGGACT	38245	70.40125	5
AGTAGGG	19780	69.31259	2
TAGGGCA	5425	68.8098	4
GTTTTTT	173690	67.05592	2
GACTTAA	33070	66.68942	8
GTAGGGA	9390	66.23977	3
ATAGAGG	8685	65.7676	1
TAGGGAC	6620	65.6211	4
GGTAAGG	7325	65.26032	1
GGACTTA	34200	65.10428	7
AGATAGG	6940	64.54174	1
AAGGGGC	42730	64.51945	4
GATAGGG	17820	64.03434	2
ATAGGGA	8350	63.792263	3
AATAGGG	16460	63.640892	2
CAGGGAC	34815	63.347363	4
GTAGGGT	4045	62.9949	3
ATAGCGG	2945	62.946865	1