SRR3126605.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126605.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1876310
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15547	0.8285944220304746	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGGAATAT	4355	0.23210450298724625	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	4046	0.21563600897506274	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	3384	0.18035399267711624	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	3280	0.17481119857592828	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2843	0.15152080413151345	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2753	0.14672415539010078	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2274	0.12119532486636003	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5750	82.89539	1
ACGGGTA	220	81.17834	4
AGGGATG	3375	77.8426	5
ACGGGAT	610	77.04588	4
TAGGGCG	420	74.97298	4
GGTAAGG	1045	74.29446	1
AGGGTAC	670	73.65356	5
TAGGGTA	645	73.59375	4
GCATAGG	420	72.820366	1
AGGGCAT	1665	72.26117	5
CGAAGGG	1900	72.011826	2
AGGGATC	1685	71.96131	5
GAGGGAT	2645	71.60752	4
ATAGCGG	480	71.56001	1
AAGGGTA	1130	71.53676	4
CCGTACA	2240	71.12642	3
CGTAGGG	595	71.11972	2
TAAGGGA	1750	69.55702	3
TAGGGAT	1565	69.370834	4
AAGGGAC	1735	69.34573	4