SRR3126604.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126604.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1907069
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15738	0.8252454420894053	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	4689	0.24587469042808624	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGGAATAT	4012	0.21037518831253615	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	3697	0.19385769471372039	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	3684	0.19317602037472162	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2812	0.14745140317419034	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2769	0.14519663420673296	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2084	0.10927764019026055	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTT	1969	0.10324744411450242	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5550	83.802315	1
AGGGATG	3445	79.66731	5
CGTAGGG	620	77.31117	2
AGGGCAT	1665	75.07995	5
ACGGGAT	630	73.85012	4
TAGGGCG	380	72.96674	4
ATAGGGA	1805	72.90166	3
ACGGGTA	220	72.629456	4
TAGGGCA	1065	72.3687	4
TAGGGTA	560	71.3325	4
AGGGTAC	785	71.24163	5
GGTAAGG	1065	71.093346	1
TAGGGAT	1625	70.5656	4
CTAACGG	200	70.54138	1
AAGGGTA	1135	70.38978	4
ATAAGGG	2455	70.25033	2
GTAGGGA	1685	69.72631	3
TAGGGAC	1140	69.66881	4
AGTAGGG	3055	69.5282	2
GTAGGGC	940	69.49339	3