SRR3126467.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126467.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1118153
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9936	0.8886082673838016	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5006	0.447702595262008	No Hit
GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	1929	0.17251664128254363	No Hit
CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC	1926	0.17224834168490358	No Hit
CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	1806	0.16151635777930212	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1783	0.15945939419739516	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCACGGTGT	1620	0.14488178272561986	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3385	84.90386	1
ACGGGTA	155	84.8989	4
CTAACGG	80	82.31575	1
TAGACGG	185	81.36228	1
AGGGATG	2440	80.89752	5
ATAGCGG	300	79.96387	1
ACGGGAT	350	77.881744	4
CTACGAC	910	76.43567	5
TCCGCTA	955	75.851166	1
TAGGGTA	385	75.68446	4
GGATGGC	2260	74.86345	7
TAAGGGA	965	73.053276	3
GTAGGGT	380	72.96997	3
AGTAGGG	1730	72.81857	2
GGTAAGG	550	72.69443	1
TAGCGGG	655	72.48256	2
AGGGCAT	865	72.26222	5
AGGGTAT	620	72.01246	5
AGGGAAT	1645	71.99634	5
CGAAGGG	1075	71.7115	2