SRR3126466.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126466.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1140524
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10077	0.8835412494607741	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5279	0.4628574234299322	No Hit
GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	2112	0.18517804097064156	No Hit
CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC	1958	0.17167547548319895	No Hit
CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	1933	0.16948350056640632	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCACGGTGT	1723	0.15107091126534822	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1696	0.14870357835521217	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1154	0.10118156215914789	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3625	86.04065	1
TAGACGG	135	80.14791	1
AGGGATG	2585	78.90221	5
TCCGCTA	980	78.24555	1
AGGGCAT	955	77.26028	5
TAAGGGA	1075	76.50495	3
AGTACGG	155	75.87635	1
ACGGGAT	370	74.939415	4
CTACGAC	1030	74.82843	5
AGTAGGG	1865	73.325516	2
GGATGGC	2200	73.27088	7
GAGGGAT	1615	73.04007	4
ACGGGTA	155	72.767845	4
GTACGGG	350	72.50478	2
CGCTACG	1065	72.36927	3
GGTAAGG	555	72.048355	1
AAGGGCA	1895	71.919846	4
AGAGGGC	1590	71.52835	3
TAGGGTA	415	71.34318	4
AAGGGAT	2380	71.2837	4