SRR3126451.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126451.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2037554
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17310	0.849548036518296	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5757	0.2825446589391005	No Hit
GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	3173	0.15572593413475175	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2865	0.14060977034228295	No Hit
CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2848	0.13977543662646488	No Hit
CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2555	0.12539544964207083	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTGGACTGG	2166	0.10630393108599821	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTT	2041	0.1001691243520417	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5655	84.43641	1
TAGGGCA	1225	80.93794	4
AGGGATG	3480	75.48112	5
CGTAGGG	670	75.04563	2
AGTAGGG	3010	74.93612	2
ACGGGAT	680	74.63124	4
GTAGGGC	1025	74.269005	3
ACGACCA	1285	73.13804	7
GGTAAGG	1055	73.12868	1
AAGGGAT	3780	72.971306	4
AGGGTAC	955	72.82225	5
GTAGGGA	1615	72.74178	3
GTAGGGT	820	71.63291	3
CTACGAC	1350	71.35524	5
AGGGAAT	2845	70.52635	5
ACGGGTA	220	70.485054	4
TAAGGGA	2015	70.42848	3
AGGGATC	1615	70.12135	5
AGGGCAT	1855	69.91509	5
TCCGCTA	1390	69.71861	1