SRR3126439.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126439.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1691051
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13955	0.82522644201742	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	3428	0.2027141700634694	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	3417	0.20206368702067531	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	3350	0.19810165394183854	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3186	0.18840354312199928	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTTGGTACA	2949	0.1743885902908901	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2746	0.1623842214102354	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTT	1753	0.10366334309255014	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5000	84.387955	1
CGTAGGG	545	83.64156	2
TAGGGCG	300	79.890625	4
AGGGATG	3055	78.14468	5
TAGGGTA	665	77.02856	4
ACGGGTA	110	76.90007	4
GTAGGGT	650	75.19118	3
GTACGGG	345	74.91875	2
TAGGGTC	360	74.407936	4
AGGGTAC	765	73.71684	5
ATAGGGC	1260	73.4755	3
AGGGAAT	2120	73.37347	5
GTAGGGA	1575	72.2074	3
ATAGCGG	285	70.971115	1
GAGGGAT	2440	70.87693	4
AGTAGGG	2780	70.82982	2
GGATGGC	2795	70.785965	7
TAGGGCA	1100	70.49173	4
AGGGTAT	900	69.969574	5
ATAGGGA	1565	69.96623	3