SRR3126371.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126371.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1451092
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12050	0.8304090988028325	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGTATTCA	3887	0.2678672337798017	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3228	0.22245315941373808	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3210	0.22121271428689565	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3174	0.21873182403321084	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2575	0.1774525667566219	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1753	0.12080557263081872	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	1569	0.10812546688976302	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGGGTA	110	85.450005	4
CGTTTTT	4575	84.86071	1
TAGGGCA	750	80.20907	4
CGTAGGG	315	77.6233	2
ATAGGGC	730	75.32476	3
GTAGGGC	705	74.6627	3
TAGGGTA	425	74.09018	4
AGGGATG	1350	73.10722	5
ACGGGAT	325	72.30385	4
TAGGGTC	420	71.61524	4
GAATAGG	710	71.582886	1
CGAAGGG	1280	71.26742	2
AGTAGGG	2215	70.47964	2
CCGTACA	2000	69.556305	3
GTAGGGT	510	69.113976	3
AGGGCAT	1150	68.65722	5
GTAGGGA	890	68.64804	3
AGTAAGG	810	68.55527	1
CGTACAC	2035	68.36001	4
AGGGAAT	1515	68.2472	5